STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FRAAL4521Hypothetical protein; No homology to any previously reported sequences. (1053 aa)    
Predicted Functional Partners:
aceF
Dihydrolipoamide acyltransferase component; Function of strongly homologous gene; enzyme.
  
 0.961
FRAAL3226
Putative dihydrolipoamide acyltransferase component E2; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme.
  
 0.961
lpd
Dihydrolipoyl dehydrogenase; Function of strongly homologous gene; enzyme.
  
 
 0.950
lpdA
Dihydrolipoyl dehydrogenase; Function of strongly homologous gene; enzyme.
  
 
 0.950
pykA
Pyruvate kinase; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the pyruvate kinase family.
  
 
 0.935
FRAAL3253
Pyruvate-flavodoxin oxidoreductase; Function of strongly homologous gene; enzyme.
    
 0.933
FRAAL0680
Pyruvate carboxylase 2 (Pyruvic carboxylase 2) (PCB 2); Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second.
    
 0.919
FRAAL0071
Pyruvate dehydrogenase E1 component, alpha subunit; Function of strongly homologous gene; enzyme.
    
 0.918
FRAAL3228
Putative branched-chain alpha keto acid dehydrogenase E1 alpha subunit; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme.
    
 0.918
FRAAL4280
Putative branched-chain alpha-keto acid dehydrogenase E1-alpha subunit; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme.
    
 0.918
Your Current Organism:
Frankia alni
NCBI taxonomy Id: 326424
Other names: F. alni ACN14a, Frankia alni ACN14a, Frankia alni str. ACN14a, Frankia alni strain ACN14a, Frankia sp. ACN14a
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.