Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
FRAAL4564 | FRAAL4565 | FRAAL4564 | FRAAL4565 | Putative DNA-binding protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; regulator. | Hypothetical protein; No homology to any previously reported sequences. | 0.442 |
FRAAL4564 | sufB | FRAAL4564 | FRAAL4563 | Putative DNA-binding protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; regulator. | Transport protein associated with Fe-S cluster assembly; Function of strongly homologous gene; transporter. | 0.957 |
FRAAL4565 | FRAAL4564 | FRAAL4565 | FRAAL4564 | Hypothetical protein; No homology to any previously reported sequences. | Putative DNA-binding protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; regulator. | 0.442 |
FRAAL4565 | glpK | FRAAL4565 | FRAAL4566 | Hypothetical protein; No homology to any previously reported sequences. | Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family. | 0.548 |
FRAAL4565 | sufB | FRAAL4565 | FRAAL4563 | Hypothetical protein; No homology to any previously reported sequences. | Transport protein associated with Fe-S cluster assembly; Function of strongly homologous gene; transporter. | 0.442 |
glpK | FRAAL4565 | FRAAL4566 | FRAAL4565 | Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family. | Hypothetical protein; No homology to any previously reported sequences. | 0.548 |
sufB | FRAAL4564 | FRAAL4563 | FRAAL4564 | Transport protein associated with Fe-S cluster assembly; Function of strongly homologous gene; transporter. | Putative DNA-binding protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; regulator. | 0.957 |
sufB | FRAAL4565 | FRAAL4563 | FRAAL4565 | Transport protein associated with Fe-S cluster assembly; Function of strongly homologous gene; transporter. | Hypothetical protein; No homology to any previously reported sequences. | 0.442 |