STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
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Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FRAAL4591Conserved hypothetical protein; Required for morphogenesis under gluconeogenic growth conditions; Belongs to the gluconeogenesis factor family. (483 aa)    
Predicted Functional Partners:
FRAAL4592
Putative kinase; Displays ATPase and GTPase activities.
  
  
 0.955
whiA
Putative WhiA type transcriptional regulator (Sporulation regulatory protein); Involved in cell division and chromosome segregation.
 
  
 0.897
uvrC
DNA excision repair enzyme UvrABC; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision.
       0.824
FRAAL5686
Putative LytR family Transcriptional regulator; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; regulator.
  
     0.612
FRAAL4564
Putative DNA-binding protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; regulator.
  
     0.602
FRAAL1259
Putative oxidoreductase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme.
  
  
 0.600
FRAAL1229
Putative membrane-bound transcriptional regulator; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; regulator.
  
     0.591
glmU
N-acetylglucosamine-1-phosphate uridyltransferase; Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP-GlcNAc). The C- terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N- acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5-monophosphate (from uridine 5- triphosphate), a reaction catalyzed by the N-terminal domain.
 
   
 0.581
FRAAL4760
Conserved hypothetical protein; No homology to any previously reported sequences.
  
     0.563
FRAAL4589
Hypothetical protein; No homology to any previously reported sequences.
       0.551
Your Current Organism:
Frankia alni
NCBI taxonomy Id: 326424
Other names: F. alni ACN14a, Frankia alni ACN14a, Frankia alni str. ACN14a, Frankia alni strain ACN14a, Frankia sp. ACN14a
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.