STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FRAAL4634Putative halogenase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme. (501 aa)    
Predicted Functional Partners:
FRAAL1336
Hypothetical protein; No homology to any previously reported sequences.
  
     0.564
FRAAL4635
Hypothetical protein; No homology to any previously reported sequences.
       0.509
fixA
Electron transfer flavoprotein beta subunit; Function of strongly homologous gene; carrier.
  
 
 0.493
FRAAL2561
Putative type I polyketide synthase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme.
 
 
 0.453
FRAAL2563
Putative type 1 Modular polyketide synthase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme.
 
 
 0.433
FRAAL2560
Putative modular polyketide synthase (loading and extender module); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme.
 
 
 0.427
idi
Isopentenyl diphosphate isomerase; Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its highly electrophilic allylic isomer, dimethylallyl diphosphate (DMAPP).
  
 
 0.425
FRAAL4071
Putative Enoyl-[acyl-carrier-protein] reductase (NADPH, B-specific); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme.
 
 
 0.417
FRAAL5563
Hypothetical protein; No homology to any previously reported sequences.
  
     0.417
FRAAL1809
Na+/H+ antiporter; Function of strongly homologous gene; transporter.
 
  
 0.411
Your Current Organism:
Frankia alni
NCBI taxonomy Id: 326424
Other names: F. alni ACN14a, Frankia alni ACN14a, Frankia alni str. ACN14a, Frankia alni strain ACN14a, Frankia sp. ACN14a
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.