STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FRAAL4727Hypothetical protein; No homology to any previously reported sequences. (140 aa)    
Predicted Functional Partners:
FRAAL1174
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
   
 0.771
FRAAL6455
Putative two-component system sensory histidine kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme.
 
 
 0.727
FRAAL4194
Putative hybrid sensor histidine kinase/response regulator; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; regulator.
  
 
 0.702
FRAAL6414
Putative two-component system sensory histidine kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme.
 
 
 
 0.685
FRAAL6555
Putative Adenylate cyclase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme.
  
 0.582
FRAAL4377
Putative WD-repeat protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
   
 0.581
FRAAL1318
Putative Two-component hybrid sensor and regulator; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; regulator.
 
 
 0.574
FRAAL4022
Putative two component sensor serine/threonine kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme.
  
 
 0.549
dctA
C4-dicarboxylate transport protein; Function of strongly homologous gene; transporter; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family.
 
 
 
 0.503
aqpZ
Water channel (aquaporin Z) (MIP family); Function of strongly homologous gene; transporter; Belongs to the MIP/aquaporin (TC 1.A.8) family.
   
 0.484
Your Current Organism:
Frankia alni
NCBI taxonomy Id: 326424
Other names: F. alni ACN14a, Frankia alni ACN14a, Frankia alni str. ACN14a, Frankia alni strain ACN14a, Frankia sp. ACN14a
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.