STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
FRAAL5259Putative GntR-family transcriptional regulator; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; regulator. (350 aa)    
Predicted Functional Partners:
FRAAL6405
Hypothetical protein; No homology to any previously reported sequences; regulator.
 
  
 0.721
FRAAL0375
Putative GntR-family transcriptional regulator; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; regulator.
 
  
 0.656
FRAAL3984
Putative GntR-family transcriptional regulator; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; regulator.
 
  
 0.606
FRAAL1728
Putative transcriptional regulator (GntR-family); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; regulator.
  
  
 0.580
FRAAL0287
Putative regulatory protein KorSA, GntR-family transcriptional regulator; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; regulator.
  
  
 0.578
FRAAL4680
Putative transcriptional regulator (GntR-family); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; regulator.
  
  
 0.576
gltX
Glutamyl-tRNA synthetase (Glutamate--tRNA ligase); Catalyzes the attachment of glutamate to tRNA(Glu) in a two- step reaction: glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu).
  
    0.487
FRAAL3499
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.480
FRAAL5258
Hypothetical protein; No homology to any previously reported sequences.
       0.471
FRAAL5478
Putative IclR-family transcriptional regulator; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; regulator.
 
  
 0.471
Your Current Organism:
Frankia alni
NCBI taxonomy Id: 326424
Other names: F. alni ACN14a, Frankia alni ACN14a, Frankia alni str. ACN14a, Frankia alni strain ACN14a, Frankia sp. ACN14a
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.