STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FRAAL5273Putative aldehyde dehydrogenase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme; Belongs to the aldehyde dehydrogenase family. (502 aa)    
Predicted Functional Partners:
acs
acetyl-CoA synthetase, has propionyl-CoA synthetase activity; Function of strongly homologous gene; enzyme.
  
 0.938
FRAAL1423
Putative aminotransferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
 
 0.929
gabT
4-aminobutyrate aminotransferase, PLP-dependent; Function of strongly homologous gene; enzyme; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
 
 0.929
ackA
Acetate kinase A (propionate kinase 2); Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family.
 
 
 0.923
mmsA
Methylmalonate-semialdehyde dehydrogenase [acylating](MMSDH); Function of strongly homologous gene; enzyme.
  
  
 
0.920
FRAAL1802
Putative pyruvate dehydrogenase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme; Belongs to the TPP enzyme family.
 
 0.917
gadB
Glutamate decarboxylase, PLP-dependent, isozyme beta; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the group II decarboxylase family.
   
 0.916
FRAAL1415
Putative nitrilase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme.
   
 0.915
adhA
NADP-dependent alcohol dehydrogenase; Function of strongly homologous gene; enzyme.
  
 
 0.913
acyP
Putative acylphosphatase (Acylphosphate phosphohydrolase); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme.
    
 0.906
Your Current Organism:
Frankia alni
NCBI taxonomy Id: 326424
Other names: F. alni ACN14a, Frankia alni ACN14a, Frankia alni str. ACN14a, Frankia alni strain ACN14a, Frankia sp. ACN14a
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