STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FRAAL5334Putative Bacteriophytochrome (Phytochrome-like protein); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; receptor. (783 aa)    
Predicted Functional Partners:
FRAAL4194
Putative hybrid sensor histidine kinase/response regulator; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; regulator.
 
 
 0.995
FRAAL1318
Putative Two-component hybrid sensor and regulator; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; regulator.
 
 
 0.962
FRAAL5335
Putative Bacteriophytochrome heme oxygenase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme.
 
   
 0.952
FRAAL0652
Putative two-component sensor protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; regulator.
  
 0.946
FRAAL5907
Hypothetical protein; No homology to any previously reported sequences.
 
 
 0.937
FRAAL3242
Putative sensor histidine kinase with multiple PAS and a response regulator receiver domain; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; regulator.
 
 
 0.935
FRAAL1279
Putative two component hybrid sensor kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme.
 
 0.931
FRAAL6414
Putative two-component system sensory histidine kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme.
 
 0.928
FRAAL5212
Putative two-component sensor; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme.
    
 0.908
FRAAL1954
Hypothetical protein; Homologs of previously reported genes of unknown function.
 
  
 0.857
Your Current Organism:
Frankia alni
NCBI taxonomy Id: 326424
Other names: F. alni ACN14a, Frankia alni ACN14a, Frankia alni str. ACN14a, Frankia alni strain ACN14a, Frankia sp. ACN14a
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.