STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FRAAL5386Putative nitrilotriacetate monooxygenase (Component A); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme. (457 aa)    
Predicted Functional Partners:
FRAAL5385
Hypothetical protein. putative 2, 4-dihydroxybenzoate monooxygenase; No homology to any previously reported sequences.
  
  
 0.781
FRAAL3868
Putative alkanesulfonate monooxygenase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme.
  
    0.687
ssuD
Alkanesulfonate monooxygenase; Function of strongly homologous gene; enzyme.
  
    0.672
FRAAL0777
Putative FMN reductase (Sulfate starvation-induced protein 4) (SSI4); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme.
 
 
 0.633
FRAAL5384
Hypothetical protein; No homology to any previously reported sequences.
  
    0.543
FRAAL5387
Putative ATP-binding ABC transporter protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; transporter; Belongs to the ABC transporter superfamily.
       0.519
ssuD-2
Alkanesulfonate monooxygenase, FMNH(2)-dependent; Function of strongly homologous gene; enzyme.
  
    0.515
FRAAL5383
Hypothetical protein; No homology to any previously reported sequences.
       0.428
FRAAL5388
Putative dipeptide transport protein (ABC superfamily, membrane); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; transporter.
       0.404
FRAAL5389
Putative ABC transporter permease protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; transporter.
       0.404
Your Current Organism:
Frankia alni
NCBI taxonomy Id: 326424
Other names: F. alni ACN14a, Frankia alni ACN14a, Frankia alni str. ACN14a, Frankia alni strain ACN14a, Frankia sp. ACN14a
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