STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FRAAL5497Hypothetical protein; No homology to any previously reported sequences. (523 aa)    
Predicted Functional Partners:
FRAAL5496
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
 
     0.809
FRAAL5495
Hypothetical protein; No homology to any previously reported sequences.
       0.675
FRAAL5498
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
       0.588
FRAAL0550
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.572
FRAAL0551
Putative thiamine biosynthesis lipoprotein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein.
 
     0.540
FRAAL0548
Putative oxidoreductase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme.
  
     0.510
FRAAL3996
Putative transmembrane efflux pump (multidrug resistance related protein); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; transporter.
  
 
  0.504
FRAAL0441
Hypothetical protein; No homology to any previously reported sequences.
  
     0.503
FRAAL4785
Putative mutidrug efflux permease; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; transporter.
  
 
  0.495
FRAAL5326
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
 
  0.479
Your Current Organism:
Frankia alni
NCBI taxonomy Id: 326424
Other names: F. alni ACN14a, Frankia alni ACN14a, Frankia alni str. ACN14a, Frankia alni strain ACN14a, Frankia sp. ACN14a
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.