STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FRAAL5914Putative cellulose-binding protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme. (238 aa)    
Predicted Functional Partners:
FRAAL5055
Hypothetical protein; No homology to any previously reported sequences.
  
     0.645
FRAAL4567
Putative DNA-binding protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; regulator.
  
     0.618
FRAAL1300
Putative integral membrane protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
  
 
   0.610
FRAAL5240
Putative transcriptional regulator (DNA-binding protein); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; regulator.
  
     0.609
FRAAL1316
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.607
FRAAL1314
Putative HTH-type transcriptional regulator; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; regulator.
  
     0.604
FRAAL6080
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.584
FRAAL5913
Crotonyl CoA reductase; Function of strongly homologous gene; enzyme.
       0.563
FRAAL2776
Putative DNA-binding protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
  
     0.540
FRAAL1299
Hypothetical protein; No homology to any previously reported sequences.
  
 
   0.531
Your Current Organism:
Frankia alni
NCBI taxonomy Id: 326424
Other names: F. alni ACN14a, Frankia alni ACN14a, Frankia alni str. ACN14a, Frankia alni strain ACN14a, Frankia sp. ACN14a
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.