STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FRAAL5988Putative amino acid transport protein (ABC superfamily, atp_bind); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme. (252 aa)    
Predicted Functional Partners:
FRAAL5987
Putative amino acid transport protein (ABC superfamily, membrane); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; transporter.
 0.999
gltK
Glutamate permease; Function of strongly homologous gene; enzyme.
 
 0.969
FRAAL2383
Putative amino acid transport protein (ABC superfamily, membrane); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; transporter.
 
 0.967
FRAAL5986
Putative arginine transport protein (ABC superfamily, peri_bind); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; transporter.
 
 0.967
FRAAL5715
Putative glutamate transport protein (ABC superfamily, membrane); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; transporter.
 
 0.949
FRAAL6467
ABC transporter permease protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; transporter.
      0.901
FRAAL5714
Putative glutamate binding protein of ABC transporter system; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; transporter.
 
 0.889
modB
Molybdenum ABC transporter membrane subunit; Function of strongly homologous gene; transporter.
    
 0.887
FRAAL3893
Putative ABC transporter glutamine-binding protein GlnH; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; transporter.
 
 
 0.860
FRAAL4331
Putative transporter substrate-binding protein (partial); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; transporter.
 
 
 0.858
Your Current Organism:
Frankia alni
NCBI taxonomy Id: 326424
Other names: F. alni ACN14a, Frankia alni ACN14a, Frankia alni str. ACN14a, Frankia alni strain ACN14a, Frankia sp. ACN14a
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