STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FRAAL6456Hypothetical protein; No homology to any previously reported sequences. (860 aa)    
Predicted Functional Partners:
FRAAL6415
Hypothetical protein; No homology to any previously reported sequences.
 
 
 0.844
FRAAL6574
Anti-sigma-B factor antagonist (Anti-anti-sigma-B factor); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; factor; Belongs to the anti-sigma-factor antagonist family.
 
 
 0.789
FRAAL4021
Putative Sigma factor PP2C-like phosphatases; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme.
  
     0.743
FRAAL6455
Putative two-component system sensory histidine kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme.
 
  
 0.743
FRAAL4194
Putative hybrid sensor histidine kinase/response regulator; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; regulator.
 
  
 0.681
FRAAL0494
Putative anti-sigma factor kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme.
 
 
 0.672
FRAAL1318
Putative Two-component hybrid sensor and regulator; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; regulator.
  
  
 0.599
FRAAL4755
Putative membrane phosphatase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme.
  
     0.574
FRAAL6414
Putative two-component system sensory histidine kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme.
 
  
 0.574
FRAAL0771
Putative signaling protein with a PAS domain; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; regulator.
  
  
 0.566
Your Current Organism:
Frankia alni
NCBI taxonomy Id: 326424
Other names: F. alni ACN14a, Frankia alni ACN14a, Frankia alni str. ACN14a, Frankia alni strain ACN14a, Frankia sp. ACN14a
Server load: medium (46%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.