STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gdhAGlutamate dehydrogenase (GDH); Function of strongly homologous gene; enzyme; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. (420 aa)    
Predicted Functional Partners:
gltB
Glutamate synthase, large subunit; Function of strongly homologous gene; enzyme.
  
 0.999
glnA
Glutamine synthetase; Function of strongly homologous gene; enzyme.
  
 
 0.968
FRAAL0678
Glutamine synthetase (Glutamate--ammonia ligase); Function of strongly homologous gene; enzyme; Belongs to the glutamine synthetase family.
  
 
 0.955
FRAAL6426
Putative glutamine synthetase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme; Belongs to the glutamine synthetase family.
  
 
 0.954
FRAAL0156
Putative NAD-specific glutamate dehydrogenase (NAD-GDH); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme.
    
 0.948
glnA1
Glutamine synthetase 2 (Glutamate--ammonia ligase 2); Function of strongly homologous gene; enzyme; Belongs to the glutamine synthetase family.
  
 
 0.948
gltD
Glutamate synthase, small subunit, nucleotide-binding, 4Fe-4S protein; Function of strongly homologous gene; enzyme.
  
 0.947
glnII
Glutamine synthetase II (Glutamate--ammonia ligase II) (GSII); Function of homologous gene experimentally demonstrated in an other organism; enzyme.
  
 
 0.946
nirB
Nitrite reductase, large subunit, nucleotide-binding; Function of strongly homologous gene; enzyme; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
   
 
 0.941
murI
Glutamate racemase; Provides the (R)-glutamate required for cell wall biosynthesis.
  
 
 0.923
Your Current Organism:
Frankia alni
NCBI taxonomy Id: 326424
Other names: F. alni ACN14a, Frankia alni ACN14a, Frankia alni str. ACN14a, Frankia alni strain ACN14a, Frankia sp. ACN14a
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.