STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
otsATrehalose-phosphate synthase; Function of strongly homologous gene; enzyme. (499 aa)    
Predicted Functional Partners:
otsB
Trehalose-phosphatase; Removes the phosphate from trehalose 6-phosphate to produce free trehalose.
 
 
 0.997
galU
UTP--glucose-1-phosphate uridylyltransferase; Function of strongly homologous gene; enzyme.
    
 0.949
FRAAL2283
Trehalose 6-phosphate synthase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme.
  
  
 
0.913
FRAAL1901
Putative glycosyl transferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme.
    
 0.907
FRAAL5287
Hypothetical protein; No homology to any previously reported sequences.
    
 0.907
FRAAL6625
Hypothetical protein; No homology to any previously reported sequences.
    
 0.907
glgC
Glucose-1-phosphate adenylyltransferase; Involved in the biosynthesis of ADP-glucose, a building block required for the elongation reactions to produce glycogen. Catalyzes the reaction between ATP and alpha-D-glucose 1-phosphate (G1P) to produce pyrophosphate and ADP-Glc; Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family.
    
 0.899
treY
Maltooligosyl trehalose synthase ((1, 4)-alpha-D-glucan 1-alpha-D-glucosylmutase); Function of strongly homologous gene; enzyme.
  
  
 0.812
FRAAL6241
Glucose-1-phosphate cytidylyltransferase (CDP-glucose pyrophosphorylase); Function of strongly homologous gene; enzyme.
     
  0.800
treZ
Malto-oligosyltrehalose trehalohydrolase; Function of strongly homologous gene; enzyme.
  
  
 0.790
Your Current Organism:
Frankia alni
NCBI taxonomy Id: 326424
Other names: F. alni ACN14a, Frankia alni ACN14a, Frankia alni str. ACN14a, Frankia alni strain ACN14a, Frankia sp. ACN14a
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.