STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cagg_0212KEGG: cau:Caur_3364 hypothetical protein. (176 aa)    
Predicted Functional Partners:
Cagg_1270
KEGG: cau:Caur_2571 multimeric flavodoxin WrbA-like protein.
   
    0.780
Cagg_0189
PFAM: protein of unknown function DUF1332; KEGG: cau:Caur_2749 hypothetical protein.
  
     0.717
Cagg_1408
PFAM: Peptidoglycan-binding domain 1 protein; KEGG: cau:Caur_0781 peptidoglycan binding domain-containing protein.
  
     0.701
Cagg_3408
KEGG: cau:Caur_0584 heat repeat-containing PBS lyase.
  
     0.693
Cagg_3132
TIGRFAM: conserved repeat domain protein; PFAM: protein of unknown function DUF11; Thrombospondin type 3 repeat; Cna B domain protein; KEGG: cau:Caur_0412 hypothetical protein.
  
     0.690
Cagg_2077
KEGG: cau:Caur_1482 hypothetical protein.
  
     0.684
Cagg_3687
KEGG: cau:Caur_3008 hypothetical protein.
  
     0.682
Cagg_0029
PFAM: GAF domain protein; KEGG: cau:Caur_2629 GAF domain-containing protein.
  
     0.678
Cagg_2008
PFAM: Na-Ca exchanger/integrin-beta4; KEGG: cau:Caur_1388 Na-Ca exchanger/integrin-beta4.
  
     0.677
Cagg_1738
TIGRFAM: conserved repeat domain protein; PFAM: protein of unknown function DUF11; KEGG: cau:Caur_0912 hypothetical protein.
  
    0.675
Your Current Organism:
Chloroflexus aggregans
NCBI taxonomy Id: 326427
Other names: C. aggregans DSM 9485, Chloroflexus aggregans DSM 9485, Chloroflexus aggregans MD-66, Chloroflexus aggregans str. DSM 9485, Chloroflexus aggregans strain DSM 9485
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.