STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cagg_0615KEGG: cau:Caur_3279 ATPase involved in chromosome partitioning-like protein. (374 aa)    
Predicted Functional Partners:
Cagg_0616
PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: cau:Caur_3278 short-chain dehydrogenase/reductase SDR; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
   0.719
Cagg_0614
PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: cau:Caur_2791 glyoxalase/bleomycin resistance protein/dioxygenase.
       0.527
Cagg_0735
PFAM: phosphatidate cytidylyltransferase; KEGG: cau:Caur_2667 phosphatidate cytidylyltransferase.
  
 
   0.457
Cagg_0951
SMART: Mov34/MPN/PAD-1 family protein; KEGG: cau:Caur_3490 Mov34/MPN/PAD-1 family protein.
  
   0.409
Your Current Organism:
Chloroflexus aggregans
NCBI taxonomy Id: 326427
Other names: C. aggregans DSM 9485, Chloroflexus aggregans DSM 9485, Chloroflexus aggregans MD-66, Chloroflexus aggregans str. DSM 9485, Chloroflexus aggregans strain DSM 9485
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