STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cagg_0751FHA modulated ABC efflux pump with fused ATPase and integral membrane subunits; PFAM: Forkhead-associated protein; ABC transporter related; ABC-2 type transporter; SMART: AAA ATPase; KEGG: cau:Caur_2655 ABC transporter related. (863 aa)    
Predicted Functional Partners:
Cagg_3222
PFAM: protein of unknown function RIO1; tyrosine protein kinase; PASTA domain containing protein; Serine/threonine protein kinase-related; SMART: serine/threonine protein kinase; KEGG: cau:Caur_0486 protein kinase.
  
 
 0.952
Cagg_0145
PFAM: glutamine amidotransferase class-II; glutamate synthase alpha subunit domain protein; ferredoxin-dependent glutamate synthase; glutamate synthase; KEGG: cau:Caur_3258 glutamate synthase (ferredoxin).
  
   0.839
Cagg_0363
PFAM: nitroreductase; KEGG: cau:Caur_3614 nitroreductase.
  
  
 0.781
Cagg_0516
PFAM: nitroreductase; KEGG: cau:Caur_3170 nitroreductase; Belongs to the flavin oxidoreductase frp family.
  
  
 0.781
Cagg_3723
2-oxoglutarate dehydrogenase, E1 subunit; E1 component of the 2-oxoglutarate dehydrogenase (OGDH) complex which catalyzes the decarboxylation of 2-oxoglutarate, the first step in the conversion of 2-oxoglutarate to succinyl-CoA and CO(2).
    
 
 0.759
Cagg_3394
PFAM: AMP-dependent synthetase and ligase; Enoyl-CoA hydratase/isomerase; Alcohol dehydrogenase GroES domain protein; KEGG: cau:Caur_0613 AMP-dependent synthetase and ligase.
 
 0.730
Cagg_3772
PFAM: protein of unknown function RIO1; tyrosine protein kinase; TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; Serine/threonine protein kinase-related; SMART: serine/threonine protein kinase; Tetratricopeptide domain protein; KEGG: cau:Caur_2958 protein kinase.
  
 
 0.711
Cagg_3042
PFAM: WD-40 repeat protein; SMART: serine/threonine protein kinase; KEGG: cau:Caur_2351 WD-40 repeat-containing protein.
 
 0.707
Cagg_2008
PFAM: Na-Ca exchanger/integrin-beta4; KEGG: cau:Caur_1388 Na-Ca exchanger/integrin-beta4.
  
 
 0.700
Cagg_0067
Serine/threonine protein kinase with WD40 repeats; PFAM: tyrosine protein kinase; WD-40 repeat protein; aminoglycoside phosphotransferase; SMART: serine/threonine protein kinase; KEGG: cau:Caur_3288 WD-40 repeat-containing protein.
 
 0.696
Your Current Organism:
Chloroflexus aggregans
NCBI taxonomy Id: 326427
Other names: C. aggregans DSM 9485, Chloroflexus aggregans DSM 9485, Chloroflexus aggregans MD-66, Chloroflexus aggregans str. DSM 9485, Chloroflexus aggregans strain DSM 9485
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