Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Cagg_0803KEGG: cau:Caur_3765 glycosyl hydrolase BNR repeat-containing glycosyl hydrolase. (548 aa)    
Predicted Functional Partners:
Cagg_0802
PFAM: O-antigen polymerase; KEGG: cau:Caur_3764 O-antigen polymerase.
 
     0.957
Cagg_0804
KEGG: cau:Caur_3766 hypothetical protein.
 
     0.946
Cagg_0808
KEGG: cau:Caur_3769 laminin G, domain-containing 2.
 
     0.841
Cagg_0792
KEGG: cau:Caur_3754 hypothetical protein.
 
     0.811
Cagg_0791
PFAM: lipopolysaccharide biosynthesis protein; KEGG: cau:Caur_3753 lipopolysaccharide biosynthesis protein.
 
    0.810
Cagg_0794
KEGG: cau:Caur_3756 membrane protein-like protein.
 
     0.808
Cagg_0814
KEGG: cau:Caur_3775 hypothetical protein.
 
     0.808
Cagg_0796
PFAM: polysaccharide biosynthesis protein; virulence factor MVIN family protein; KEGG: cau:Caur_3758 polysaccharide biosynthesis protein.
 
     0.805
Cagg_0822
KEGG: cau:Caur_3783 hypothetical protein.
 
     0.795
Cagg_0811
KEGG: cau:Caur_3772 hypothetical protein.
 
     0.787
Your Current Organism:
Chloroflexus aggregans
NCBI taxonomy Id: 326427
Other names: C. aggregans DSM 9485, Chloroflexus aggregans DSM 9485, Chloroflexus aggregans MD-66, Chloroflexus aggregans str. DSM 9485, Chloroflexus aggregans strain DSM 9485
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