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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cagg_0807KEGG: cau:Caur_3768 hypothetical protein. (277 aa)    
Predicted Functional Partners:
Cagg_0806
PFAM: Pyrrolo-quinoline quinone; KEGG: rrs:RoseRS_4237 pyrrolo-quinoline quinone.
 
     0.842
Cagg_0804
KEGG: cau:Caur_3766 hypothetical protein.
 
     0.818
Cagg_0814
KEGG: cau:Caur_3775 hypothetical protein.
 
     0.799
Cagg_0803
KEGG: cau:Caur_3765 glycosyl hydrolase BNR repeat-containing glycosyl hydrolase.
 
   
 0.782
Cagg_0802
PFAM: O-antigen polymerase; KEGG: cau:Caur_3764 O-antigen polymerase.
 
     0.764
Cagg_0811
KEGG: cau:Caur_3772 hypothetical protein.
 
     0.750
Cagg_0808
KEGG: cau:Caur_3769 laminin G, domain-containing 2.
 
     0.730
Cagg_0794
KEGG: cau:Caur_3756 membrane protein-like protein.
 
     0.708
Cagg_0822
KEGG: cau:Caur_3783 hypothetical protein.
 
     0.682
Cagg_0792
KEGG: cau:Caur_3754 hypothetical protein.
 
     0.678
Your Current Organism:
Chloroflexus aggregans
NCBI taxonomy Id: 326427
Other names: C. aggregans DSM 9485, Chloroflexus aggregans DSM 9485, Chloroflexus aggregans MD-66, Chloroflexus aggregans str. DSM 9485, Chloroflexus aggregans strain DSM 9485
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