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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cagg_1237KEGG: cau:Caur_0159 putative 6-pyruvoyl tetrahydropterin synthase. (130 aa)    
Predicted Functional Partners:
folE
PFAM: GTP cyclohydrolase I; KEGG: cau:Caur_2641 GTP cyclohydrolase I.
  
 
 0.974
Cagg_0018
PFAM: 6-pyruvoyl tetrahydropterin synthase and hypothetical protein; KEGG: cau:Caur_2640 putative 6-pyruvoyl tetrahydropterin synthase.
  
  
 
0.905
Cagg_1233
KEGG: cau:Caur_0159 putative 6-pyruvoyl tetrahydropterin synthase.
  
  
 
0.900
Cagg_1238
PFAM: glycosyl transferase group 1; KEGG: cau:Caur_0160 glycosyl transferase group 1.
 
     0.788
Cagg_1232
PFAM: Alcohol dehydrogenase zinc-binding domain protein; KEGG: cau:Caur_0158 alcohol dehydrogenase.
 
     0.542
hisI
TIGRFAM: phosphoribosyl-ATP diphosphatase; PFAM: phosphoribosyl-AMP cyclohydrolase; phosphoribosyl-ATP pyrophosphohydrolase; KEGG: cau:Caur_2057 phosphoribosyl-ATP diphosphatase; In the N-terminal section; belongs to the PRA-CH family.
     
 0.518
Cagg_1239
KEGG: cau:Caur_0161 hypothetical protein.
       0.508
Cagg_1236
Hypothetical protein; KEGG: LOC100134375; similar to predicted protein.
       0.459
Cagg_2419
PFAM: cyclic nucleotide-binding; Stage II sporulation E family protein; SMART: protein phosphatase 2C domain protein; KEGG: cau:Caur_1013 stage II sporulation E family protein.
    
  0.454
Cagg_0772
PFAM: cyclic nucleotide-binding; KEGG: cau:Caur_3595 cyclic nucleotide-binding.
 
  
  0.431
Your Current Organism:
Chloroflexus aggregans
NCBI taxonomy Id: 326427
Other names: C. aggregans DSM 9485, Chloroflexus aggregans DSM 9485, Chloroflexus aggregans MD-66, Chloroflexus aggregans str. DSM 9485, Chloroflexus aggregans strain DSM 9485
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