Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
Cagg_1237KEGG: cau:Caur_0159 putative 6-pyruvoyl tetrahydropterin synthase. (130 aa)    
Predicted Functional Partners:
folE
PFAM: GTP cyclohydrolase I; KEGG: cau:Caur_2641 GTP cyclohydrolase I.
  
 
 0.954
Cagg_0018
PFAM: 6-pyruvoyl tetrahydropterin synthase and hypothetical protein; KEGG: cau:Caur_2640 putative 6-pyruvoyl tetrahydropterin synthase.
  
  
 
0.905
Cagg_1233
KEGG: cau:Caur_0159 putative 6-pyruvoyl tetrahydropterin synthase.
  
  
 
0.900
Cagg_1238
PFAM: glycosyl transferase group 1; KEGG: cau:Caur_0160 glycosyl transferase group 1.
 
     0.779
Cagg_1232
PFAM: Alcohol dehydrogenase zinc-binding domain protein; KEGG: cau:Caur_0158 alcohol dehydrogenase.
 
     0.542
Cagg_1239
KEGG: cau:Caur_0161 hypothetical protein.
       0.508
hisI
TIGRFAM: phosphoribosyl-ATP diphosphatase; PFAM: phosphoribosyl-AMP cyclohydrolase; phosphoribosyl-ATP pyrophosphohydrolase; KEGG: cau:Caur_2057 phosphoribosyl-ATP diphosphatase; In the N-terminal section; belongs to the PRA-CH family.
     
 0.505
Cagg_1236
Hypothetical protein; KEGG: LOC100134375; similar to predicted protein.
       0.459
cysS
KEGG: cau:Caur_1840 cysteinyl-tRNA synthetase; TIGRFAM: cysteinyl-tRNA synthetase; PFAM: Cysteinyl-tRNA synthetase class Ia DALR; tRNA synthetase class I (M); Cysteinyl-tRNA synthetase class Ia; Belongs to the class-I aminoacyl-tRNA synthetase family.
   
  
 0.435
cysS-2
KEGG: cau:Caur_0747 cysteinyl-tRNA synthetase; TIGRFAM: cysteinyl-tRNA synthetase; PFAM: Cysteinyl-tRNA synthetase class Ia DALR; tRNA synthetase class I (M); Cysteinyl-tRNA synthetase class Ia; Belongs to the class-I aminoacyl-tRNA synthetase family.
   
  
 0.435
Your Current Organism:
Chloroflexus aggregans
NCBI taxonomy Id: 326427
Other names: C. aggregans DSM 9485, Chloroflexus aggregans DSM 9485, Chloroflexus aggregans MD-66, Chloroflexus aggregans str. DSM 9485, Chloroflexus aggregans strain DSM 9485
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