STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cagg_1366TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: rrs:RoseRS_2508 diguanylate cyclase. (369 aa)    
Predicted Functional Partners:
Cagg_0863
PFAM: response regulator receiver; metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; KEGG: cau:Caur_3090 metal dependent phophohydrolase.
 
  
 0.956
Cagg_0835
KEGG: cau:Caur_0528 PAS sensor protein; TIGRFAM: metal dependent phophohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region.
 
 0.950
Cagg_1830
Response regulator receiver modulated diguanylate cyclase; KEGG: cau:Caur_1952 diguanylate cyclase; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; response regulator receiver; Hpt domain protein; Stage II sporulation E family protein; SMART: protein phosphatase 2C domain protein.
 
  
0.848
Cagg_2748
PFAM: GAF domain protein; metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; KEGG: cau:Caur_1729 GAF domain-containing protein.
 
 0.842
Cagg_3194
KEGG: cau:Caur_0528 PAS sensor protein; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; metal-dependent phosphohydrolase HD sub domain; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; metal-dependent phosphohydrolase HD region.
 
 0.825
Cagg_0553
Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); KEGG: cau:Caur_3534 diguanylate cyclase; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; response regulator receiver; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein.
 
 
0.813
Cagg_2395
KEGG: cau:Caur_1677 metal dependent phophohydrolase; TIGRFAM: metal dependent phophohydrolase; PFAM: response regulator receiver; GAF domain protein; metal-dependent phosphohydrolase HD sub domain; Metal-dependent hydrolase HDOD; SMART: metal-dependent phosphohydrolase HD region.
 
  
 0.797
Cagg_1309
PFAM: NMT1/THI5 like domain protein; KEGG: cau:Caur_2537 NMT1/THI5-like domain-containing protein.
 
      0.727
Cagg_2419
PFAM: cyclic nucleotide-binding; Stage II sporulation E family protein; SMART: protein phosphatase 2C domain protein; KEGG: cau:Caur_1013 stage II sporulation E family protein.
  
 
 0.674
Cagg_2405
CheA signal transduction histidine kinase; PFAM: response regulator receiver; CheW domain protein; ATP-binding region ATPase domain protein; Signal transducing histidine kinase homodimeric; Hpt domain protein; KEGG: cau:Caur_1667 response regulator receiver.
 
  
 0.635
Your Current Organism:
Chloroflexus aggregans
NCBI taxonomy Id: 326427
Other names: C. aggregans DSM 9485, Chloroflexus aggregans DSM 9485, Chloroflexus aggregans MD-66, Chloroflexus aggregans str. DSM 9485, Chloroflexus aggregans strain DSM 9485
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