STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cagg_1718PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: cau:Caur_1113 alcohol dehydrogenase. (346 aa)    
Predicted Functional Partners:
Cagg_2430
PFAM: iron-containing alcohol dehydrogenase; KEGG: cau:Caur_1662 iron-containing alcohol dehydrogenase.
  
 0.972
Cagg_2535
PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: cau:Caur_1376 amine oxidase.
    
  0.902
Cagg_0596
KEGG: cau:Caur_0034 hypothetical protein.
  
 
 0.733
Cagg_0740
PFAM: iron-containing alcohol dehydrogenase; KEGG: cau:Caur_2664 iron-containing alcohol dehydrogenase.
  
 
 0.733
Cagg_1232
PFAM: Alcohol dehydrogenase zinc-binding domain protein; KEGG: cau:Caur_0158 alcohol dehydrogenase.
 
 
 0.556
Cagg_1717
KEGG: mlo:mll5670 hypothetical protein.
       0.553
Cagg_1719
PFAM: UvrD/REP helicase; KEGG: cau:Caur_1834 UvrD/REP helicase.
   
   0.553
Cagg_3394
PFAM: AMP-dependent synthetase and ligase; Enoyl-CoA hydratase/isomerase; Alcohol dehydrogenase GroES domain protein; KEGG: cau:Caur_0613 AMP-dependent synthetase and ligase.
  
  
 0.527
Cagg_3128
PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: cau:Caur_0416 alcohol dehydrogenase.
 
 
 0.525
Cagg_3495
PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: rca:Rcas_2591 alcohol dehydrogenase.
 
 
 0.441
Your Current Organism:
Chloroflexus aggregans
NCBI taxonomy Id: 326427
Other names: C. aggregans DSM 9485, Chloroflexus aggregans DSM 9485, Chloroflexus aggregans MD-66, Chloroflexus aggregans str. DSM 9485, Chloroflexus aggregans strain DSM 9485
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