Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
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[Homology]
Score
Cagg_1972PFAM: UDP-N-acetylglucosamine 2-epimerase; KEGG: rca:Rcas_0784 UDP-N-acetylglucosamine 2-epimerase; Belongs to the UDP-N-acetylglucosamine 2-epimerase family. (366 aa)    
Predicted Functional Partners:
Cagg_1971
PFAM: transferase hexapeptide repeat containing protein; KEGG: rca:Rcas_0783 hexapaptide repeat-containing transferase.
    
  0.945
Cagg_1985
PFAM: transferase hexapeptide repeat containing protein; KEGG: rrs:RoseRS_4429 hexapaptide repeat-containing transferase.
  
 
 0.933
Cagg_1553
TIGRFAM: nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; 6-phosphogluconate dehydrogenase NAD-binding; 3-hydroxyacyl-CoA dehydrogenase NAD-binding; UDP-glucose/GDP-mannose dehydrogenase dimerisation; UDP-glucose/GDP-mannose dehydrogenase; KEGG: cau:Caur_2110 nucleotide sugar dehydrogenase; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.
  
 0.911
Cagg_0038
PFAM: transferase hexapeptide repeat containing protein; KEGG: cau:Caur_3908 hexapaptide repeat-containing transferase.
  
 
  0.910
Cagg_1534
PFAM: glycosyl transferase group 1; KEGG: cau:Caur_2129 glycosyl transferase group 1.
 
    0.576
Cagg_1965
PFAM: polysaccharide biosynthesis protein; virulence factor MVIN family protein; KEGG: mba:Mbar_A0025 hypothetical protein.
 
  
 0.573
Cagg_3395
PFAM: glycosyl transferase family 4; KEGG: cau:Caur_0612 glycosyl transferase family protein.
  
 0.538
Cagg_0796
PFAM: polysaccharide biosynthesis protein; virulence factor MVIN family protein; KEGG: cau:Caur_3758 polysaccharide biosynthesis protein.
  
  
 0.513
Cagg_0921
PFAM: multi antimicrobial extrusion protein MatE; polysaccharide biosynthesis protein; KEGG: cau:Caur_3733 polysaccharide biosynthesis protein.
  
  
 0.513
Cagg_2062
PFAM: multi antimicrobial extrusion protein MatE; polysaccharide biosynthesis protein; virulence factor MVIN family protein; KEGG: cau:Caur_1467 polysaccharide biosynthesis protein.
  
  
 0.513
Your Current Organism:
Chloroflexus aggregans
NCBI taxonomy Id: 326427
Other names: C. aggregans DSM 9485, Chloroflexus aggregans DSM 9485, Chloroflexus aggregans MD-66, Chloroflexus aggregans str. DSM 9485, Chloroflexus aggregans strain DSM 9485
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