STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
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Textmining
[Homology]
Score
Cagg_2001KEGG: cau:Caur_0949 hypothetical protein. (596 aa)    
Predicted Functional Partners:
Cagg_3393
Serine/threonine protein kinase; KEGG: cau:Caur_0614 hypothetical protein.
  
 
 0.801
Cagg_2008
PFAM: Na-Ca exchanger/integrin-beta4; KEGG: cau:Caur_1388 Na-Ca exchanger/integrin-beta4.
  
 
 0.798
Cagg_1770
KEGG: cau:Caur_1398 peptidase domain-containing protein.
  
     0.765
Cagg_2568
KEGG: cau:Caur_1916 hypothetical protein.
  
    0.759
Cagg_1996
PFAM: lipolytic protein G-D-S-L family; KEGG: cau:Caur_0944 GDSL family lipase.
 
   
 0.746
Cagg_1881
TIGRFAM: conserved repeat domain protein; PFAM: protein of unknown function DUF11; KEGG: cau:Caur_1091 hypothetical protein.
  
     0.744
Cagg_2198
PFAM: protein of unknown function DUF333; KEGG: cau:Caur_1689 hypothetical protein.
  
     0.743
Cagg_1022
PFAM: PBS lyase HEAT domain protein repeat-containing protein; KEGG: cau:Caur_3332 heat repeat-containing PBS lyase.
  
    0.742
Cagg_0897
KEGG: cau:Caur_3744 putative transmembrane anti-sigma factor.
  
     0.740
Cagg_2179
TIGRFAM: LPXTG-motif cell wall anchor domain protein; KEGG: cau:Caur_1201 cell wall anchor domain-containing protein.
  
     0.739
Your Current Organism:
Chloroflexus aggregans
NCBI taxonomy Id: 326427
Other names: C. aggregans DSM 9485, Chloroflexus aggregans DSM 9485, Chloroflexus aggregans MD-66, Chloroflexus aggregans str. DSM 9485, Chloroflexus aggregans strain DSM 9485
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