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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cagg_2011PFAM: glycosyl transferase group 1; KEGG: cau:Caur_1385 glycosyl transferase group 1. (373 aa)    
Predicted Functional Partners:
Cagg_2010
PFAM: beta-lactamase domain protein; KEGG: cau:Caur_1386 beta-lactamase domain-containing protein.
       0.822
Cagg_1177
PFAM: glycosyl transferase group 1; KEGG: cau:Caur_0105 glycosyl transferase group 1.
  
     0.733
Cagg_2454
PFAM: glycosyl transferase group 1; KEGG: cau:Caur_0982 glycosyl transferase group 1.
  
     0.700
Cagg_2212
PFAM: glycosyl transferase group 1; KEGG: cau:Caur_0964 glycosyl transferase group 1.
  
     0.696
Cagg_2570
PFAM: glycosyl transferase group 1; KEGG: cau:Caur_1918 glycosyl transferase group 1.
  
     0.651
Cagg_2329
PFAM: glycosyl transferase group 1; KEGG: cau:Caur_1245 glycosyl transferase group 1.
  
     0.638
Cagg_3369
PFAM: glycosyl transferase group 1; KEGG: cau:Caur_0642 glycosyl transferase group 1.
  
     0.615
Cagg_0106
PFAM: glycosyl transferase group 1; KEGG: cau:Caur_0187 glycosyl transferase group 1.
 
     0.582
Cagg_0334
PFAM: glycosyl transferase group 1; KEGG: cau:Caur_3241 glycosyl transferase group 1.
  
     0.484
Cagg_2081
PFAM: glycosyl transferase group 1; KEGG: cau:Caur_0891 glycosyl transferase group 1.
  
     0.482
Your Current Organism:
Chloroflexus aggregans
NCBI taxonomy Id: 326427
Other names: C. aggregans DSM 9485, Chloroflexus aggregans DSM 9485, Chloroflexus aggregans MD-66, Chloroflexus aggregans str. DSM 9485, Chloroflexus aggregans strain DSM 9485
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