STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cagg_2071KEGG: cau:Caur_1476 alpha-L-arabinofuranosidase-like protein. (535 aa)    
Predicted Functional Partners:
Cagg_2072
KEGG: cau:Caur_1477 hypothetical protein.
 
     0.746
Cagg_2639
Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family.
   
    0.719
Cagg_2761
PFAM: FG-GAP repeat protein; KEGG: cau:Caur_1744 pyrrolo-quinoline quinone.
  
     0.699
Cagg_3408
KEGG: cau:Caur_0584 heat repeat-containing PBS lyase.
  
     0.697
Cagg_2281
KEGG: cau:Caur_0885 hypothetical protein.
  
     0.690
Cagg_1686
PFAM: extracellular solute-binding protein family 1; KEGG: cau:Caur_1078 extracellular solute-binding protein.
 
  
 0.688
Cagg_0090
PFAM: extracellular solute-binding protein family 1; KEGG: cau:Caur_3857 extracellular solute-binding protein.
 
  
 0.684
Cagg_0921
PFAM: multi antimicrobial extrusion protein MatE; polysaccharide biosynthesis protein; KEGG: cau:Caur_3733 polysaccharide biosynthesis protein.
 
     0.679
Cagg_0885
KEGG: cau:Caur_3720 hypothetical protein.
  
     0.676
Cagg_3396
KEGG: cau:Caur_0611 TPR repeat-containing protein.
  
     0.670
Your Current Organism:
Chloroflexus aggregans
NCBI taxonomy Id: 326427
Other names: C. aggregans DSM 9485, Chloroflexus aggregans DSM 9485, Chloroflexus aggregans MD-66, Chloroflexus aggregans str. DSM 9485, Chloroflexus aggregans strain DSM 9485
Server load: medium (42%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.