STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cagg_2139TIGRFAM: parB-like partition protein; PFAM: ParB domain protein nuclease; KEGG: cau:Caur_1423 ParB-like partition protein; Belongs to the ParB family. (367 aa)    
Predicted Functional Partners:
Cagg_2138
PFAM: Cobyrinic acid ac-diamide synthase; KEGG: cau:Caur_1422 cobyrinic acid ac-diamide synthase.
 
 
 0.986
Cagg_0277
PFAM: Cobyrinic acid ac-diamide synthase; KEGG: rca:Rcas_2365 cobyrinic acid ac-diamide synthase.
 
 
 0.927
Cagg_0576
PFAM: Cobyrinic acid ac-diamide synthase; KEGG: cau:Caur_3515 cobyrinic acid ac-diamide synthase.
 
 
 0.927
Cagg_2140
PFAM: PfkB domain protein; KEGG: cau:Caur_1424 ribokinase-like domain-containing protein.
       0.790
rsmG
Methyltransferase GidB; Specifically methylates the N7 position of a guanine in 16S rRNA; Belongs to the methyltransferase superfamily. RNA methyltransferase RsmG family.
  
  
 0.778
Cagg_2352
PFAM: cell divisionFtsK/SpoIIIE; SMART: AAA ATPase; KEGG: cau:Caur_1228 cell divisionFtsK/SpoIIIE.
  
   
 0.735
Cagg_0638
KEGG: cau:Caur_2801 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD.
    
 
 0.714
Cagg_1733
KEGG: cau:Caur_0907 ATPase involved in chromosome partitioning-like protein.
  
 
 0.696
Cagg_2141
PFAM: CDP-alcohol phosphatidyltransferase; KEGG: cau:Caur_1425 CDP-alcohol phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
       0.609
gatC
glutamyl-tRNA(Gln) amidotransferase, C subunit; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatC family.
  
    0.598
Your Current Organism:
Chloroflexus aggregans
NCBI taxonomy Id: 326427
Other names: C. aggregans DSM 9485, Chloroflexus aggregans DSM 9485, Chloroflexus aggregans MD-66, Chloroflexus aggregans str. DSM 9485, Chloroflexus aggregans strain DSM 9485
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