STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cagg_2427KEGG: cau:Caur_1082 ABC-type branched-chain amino acid transport systems periplasmic component-like protein. (403 aa)    
Predicted Functional Partners:
Cagg_2426
PFAM: inner-membrane translocator; KEGG: cau:Caur_1083 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.998
Cagg_2425
PFAM: inner-membrane translocator; KEGG: cau:Caur_1084 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.997
Cagg_2423
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: cau:Caur_1086 ABC transporter related.
 
 
 0.995
Cagg_2428
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: cau:Caur_1081 ABC transporter related.
 
 
 0.994
Cagg_1861
PFAM: inner-membrane translocator; KEGG: cau:Caur_0932 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.993
Cagg_1862
PFAM: inner-membrane translocator; KEGG: cau:Caur_0931 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.992
Cagg_1860
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: cau:Caur_0933 ABC transporter related.
 
 
 0.990
Cagg_1859
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: cau:Caur_0934 ABC transporter related.
 
 
 0.984
Cagg_2429
KEGG: cau:Caur_1080 coenzyme F390 synthetase-like protein.
 
    0.861
Cagg_2047
PFAM: response regulator receiver; ANTAR domain protein; KEGG: cau:Caur_1997 response regulator receiver.
  
 
 0.828
Your Current Organism:
Chloroflexus aggregans
NCBI taxonomy Id: 326427
Other names: C. aggregans DSM 9485, Chloroflexus aggregans DSM 9485, Chloroflexus aggregans MD-66, Chloroflexus aggregans str. DSM 9485, Chloroflexus aggregans strain DSM 9485
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