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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cagg_3205PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; KEGG: cau:Caur_0517 alpha amylase catalytic region. (583 aa)    
Predicted Functional Partners:
Cagg_2090
KEGG: cau:Caur_1160 trehalose synthase; TIGRFAM: trehalose synthase; trehalose synthase-fused possible maltokinase; PFAM: aminoglycoside phosphotransferase; alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain.
 
0.968
Cagg_2094
KEGG: cau:Caur_1164 malto-oligosyltrehalose synthase; TIGRFAM: malto-oligosyltrehalose synthase; PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain.
 
 
 0.967
Cagg_3752
KEGG: cau:Caur_3107 glycogen debranching enzyme GlgX; TIGRFAM: glycogen debranching enzyme GlgX; PFAM: glycoside hydrolase family 13 domain protein; alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; Belongs to the glycosyl hydrolase 13 family.
 
0.941
glgB
1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
 
 
 0.940
Cagg_2872
KEGG: cau:Caur_0735 alpha-glucan phosphorylase; TIGRFAM: alpha-glucan phosphorylase; PFAM: glycosyl transferase family 35.
  
 0.934
Cagg_2274
PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; KEGG: cau:Caur_1536 alpha amylase catalytic region; Belongs to the glycosyl hydrolase 13 family.
 
  
 
0.933
Cagg_3180
PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; KEGG: cau:Caur_0493 alpha amylase catalytic region.
 
  
 
0.933
Cagg_3324
Alpha-glucosidase; PFAM: glycoside hydrolase family 31; KEGG: cau:Caur_1897 alpha-glucosidase; Belongs to the glycosyl hydrolase 31 family.
 
 
 0.921
Cagg_0433
KEGG: cau:Caur_3875 4-alpha-glucanotransferase; TIGRFAM: 4-alpha-glucanotransferase; PFAM: glycoside hydrolase family 77.
 
 
 0.919
Cagg_0906
KEGG: cau:Caur_3182 4-alpha-glucanotransferase; TIGRFAM: 4-alpha-glucanotransferase; PFAM: glycoside hydrolase family 77.
 
 
 0.919
Your Current Organism:
Chloroflexus aggregans
NCBI taxonomy Id: 326427
Other names: C. aggregans DSM 9485, Chloroflexus aggregans DSM 9485, Chloroflexus aggregans MD-66, Chloroflexus aggregans str. DSM 9485, Chloroflexus aggregans strain DSM 9485
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