STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cagg_3434PFAM: Domain of unknown function DUF1801; KEGG: cau:Caur_2584 hypothetical protein. (156 aa)    
Predicted Functional Partners:
Cagg_0964
KEGG: cau:Caur_3477 TPR repeat-containing protein.
  
     0.521
Cagg_0441
KEGG: cau:Caur_3883 hypothetical protein.
  
     0.503
Cagg_3429
KEGG: rca:Rcas_3020 hypothetical protein.
       0.498
Cagg_3430
KEGG: rca:Rcas_3019 hypothetical protein.
       0.498
Cagg_3431
KEGG: rca:Rcas_3018 hypothetical protein.
       0.498
Cagg_3432
KEGG: rrs:RoseRS_2040 hypothetical protein.
       0.498
Cagg_3433
KEGG: rca:Rcas_3017 hypothetical protein.
       0.498
Cagg_3428
PFAM: asparagine synthase; KEGG: nfa:nfa29020 hypothetical protein.
       0.483
Cagg_1566
TIGRFAM: glutaredoxin-like protein; PFAM: glutaredoxin; KEGG: cau:Caur_1822 glutaredoxin-like protein.
  
     0.419
Cagg_0491
KEGG: cau:Caur_3586 putative secreted protein.
 
     0.401
Your Current Organism:
Chloroflexus aggregans
NCBI taxonomy Id: 326427
Other names: C. aggregans DSM 9485, Chloroflexus aggregans DSM 9485, Chloroflexus aggregans MD-66, Chloroflexus aggregans str. DSM 9485, Chloroflexus aggregans strain DSM 9485
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.