STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cagg_3530KEGG: cau:Caur_3002 hypothetical protein. (327 aa)    
Predicted Functional Partners:
Cagg_1526
KEGG: cau:Caur_2137 hypothetical protein.
   
 
 0.817
Cagg_3383
KEGG: cau:Caur_0625 hypothetical protein.
   
 
 0.817
Cagg_3384
KEGG: cau:Caur_0624 transmembrane prediction.
   
 
 0.817
Cagg_1452
PFAM: oxidoreductase molybdopterin binding; KEGG: cau:Caur_2488 oxidoreductase molybdopterin binding.
   
 
 0.631
msrP
Oxidoreductase molybdopterin binding; Part of the MsrPQ system that repairs oxidized cell envelope proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated cell envelope proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of [...]
   
 
 0.631
Cagg_3045
PFAM: oxidoreductase molybdopterin binding; KEGG: cau:Caur_2348 oxidoreductase molybdopterin binding.
   
 
 0.631
Cagg_3529
PFAM: PHP domain protein; SMART: phosphoesterase PHP domain protein; KEGG: cau:Caur_3001 phosphotransferase domain-containing protein.
       0.495
Cagg_1522
Cytochrome c oxidase, subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).
     
 0.493
Cagg_1520
PFAM: cytochrome c oxidase subunit III; KEGG: cau:Caur_2143 cytochrome c oxidase subunit III.
  
  
 0.404
Cagg_0631
TIGRFAM: LPXTG-motif cell wall anchor domain protein; PFAM: metallophosphoesterase; 5'-Nucleotidase domain protein; KEGG: cau:Caur_3261 5'-nucleotidase domain-containing protein; Belongs to the 5'-nucleotidase family.
     
 0.400
Your Current Organism:
Chloroflexus aggregans
NCBI taxonomy Id: 326427
Other names: C. aggregans DSM 9485, Chloroflexus aggregans DSM 9485, Chloroflexus aggregans MD-66, Chloroflexus aggregans str. DSM 9485, Chloroflexus aggregans strain DSM 9485
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