Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
PSHAa0055Putative pyridoxal phosphate dependent enzyme; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; enzyme. (374 aa)    
Predicted Functional Partners:
PSHAa0054
Homologs of previously reported genes of unknown function.
 
    0.955
PSHAa1737
Putative catalase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; enzyme.
     
 0.902
katB
Catalase; Function of strongly homologous gene; enzyme; Belongs to the catalase family.
     
 0.902
iscU
Fe-S assembly protein; A scaffold on which IscS assembles Fe-S clusters. It is likely that Fe-S cluster coordination is flexible as the role of this complex is to build and then hand off Fe-S clusters.
  
 
 0.881
PSHAa0053
Putative transcriptional regulator (LRP/AsnC family); Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; regulator.
       0.751
PSHAa1655
Putative SufE protein; Function of homologous gene experimentally demonstrated in an other organism.
  
 
 0.742
PSHAa0050
Homologs of previously reported genes of unknown function.
 
     0.548
PSHAa1575
Putative outer membrane porin; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; membrane component.
  
    0.520
PSHAa0051
Homologs of previously reported genes of unknown function.
       0.482
PSHAa1437
Homologs of previously reported genes of unknown function.
  
  
 0.477
Your Current Organism:
Pseudoalteromonas haloplanktis
NCBI taxonomy Id: 326442
Other names: P. haloplanktis TAC125, Pseudoalteromonas haloplanktis TAC125, Pseudoalteromonas haloplanktis str. TAC125, Pseudoalteromonas haloplanktis strain TAC125
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