Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
PSHAa0065Putative cytochrome; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; membrane component. (219 aa)    
Predicted Functional Partners:
PSHAa0066
Homologs of previously reported genes of unknown function; factor.
 
    0.797
PSHAa0063
Putative transporter protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; membrane component.
       0.583
PSHAa0064
Putative amino acid permease; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; membrane component.
       0.583
yfiQ
Putative acyl-CoA synthetase, NAD(P)-binding, ATP-binding; Function of strongly homologous gene; enzyme.
  
     0.421
PSHAa0062
Glutathione peroxidase possibly involved in repair of phospholipid hydroperoxides; Function of strongly homologous gene; enzyme; Belongs to the glutathione peroxidase family.
       0.412
Your Current Organism:
Pseudoalteromonas haloplanktis
NCBI taxonomy Id: 326442
Other names: P. haloplanktis TAC125, Pseudoalteromonas haloplanktis TAC125, Pseudoalteromonas haloplanktis str. TAC125, Pseudoalteromonas haloplanktis strain TAC125
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