Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
PSHAa0068Putative serine secreted endoprotease, subtilase family; Function of strongly homologous gene; enzyme; Belongs to the peptidase S8 family. (1154 aa)    
Predicted Functional Partners:
PSHAa1369
Homologs of previously reported genes of unknown function.
   
 
 0.783
PSHAb0200
Putative secreted serine protease, subtilisin family, possibly excreted; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; enzyme; Belongs to the peptidase S8 family.
 
  
 0.655
ptrB
Oligopeptidase (protease II); Function of homologous gene experimentally demonstrated in an other organism; enzyme.
     
 0.627
PSHAa0067
Putative integral membrane protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; membrane component.
       0.475
PSHAa2249
Putative DNA binding protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy.
  
     0.475
PSHAb0363
Putative outer membrane porin; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; membrane component.
  
    0.465
hutG
Formiminoglutamate hydrolase; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the arginase family.
  
    0.445
PSHAa0530
Putative membrane protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; membrane component.
  
     0.437
PSHAa2649
Serine protease precursor; Function of strongly homologous gene; enzyme.
  
   
 0.434
PSHAa2936
Homologs of previously reported genes of unknown function; enzyme.
  
     0.423
Your Current Organism:
Pseudoalteromonas haloplanktis
NCBI taxonomy Id: 326442
Other names: P. haloplanktis TAC125, Pseudoalteromonas haloplanktis TAC125, Pseudoalteromonas haloplanktis str. TAC125, Pseudoalteromonas haloplanktis strain TAC125
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