Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PSHAa0083Homologs of previously reported genes of unknown function; membrane component. (280 aa)    
Predicted Functional Partners:
PSHAa0084
Putative membrane protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; membrane component.
 
     0.564
PSHAa2436
Homologs of previously reported genes of unknown function.
  
     0.563
PSHAa2045
Homologs of previously reported genes of unknown function.
  
     0.479
PSHAa0584
Homologs of previously reported genes of unknown function; transporter.
  
     0.468
PSHAa2046
Conserved protein of unknown function, with nucleotide triphosphate hydrolase domain; Homologs of previously reported genes of unknown function.
  
     0.455
PSHAa1571
Homologs of previously reported genes of unknown function; membrane component.
  
     0.443
PSHAa1888
Putative cyanophycinase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
  
     0.426
PSHAa1674
Putative membrane protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; membrane component.
  
     0.411
Your Current Organism:
Pseudoalteromonas haloplanktis
NCBI taxonomy Id: 326442
Other names: P. haloplanktis TAC125, Pseudoalteromonas haloplanktis TAC125, Pseudoalteromonas haloplanktis str. TAC125, Pseudoalteromonas haloplanktis strain TAC125
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