STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PSHAa0124Conserved protein of unknown function (similar to E. coli YacL); Homologs of previously reported genes of unknown function. (148 aa)    
Predicted Functional Partners:
PSHAa1638
Homologs of previously reported genes of unknown function.
  
     0.686
PSHAa0610
Homologs of previously reported genes of unknown function.
    
   0.674
PSHAa0123
Homologs of previously reported genes of unknown function.
       0.651
PSHAa0988
Homologs of previously reported genes of unknown function.
  
     0.617
gsk
Inosine-guanosine kinase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
  
     0.556
PSHAb0352
Putative membrane protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; membrane component.
  
     0.536
PSHAa0125
Homologs of previously reported genes of unknown function.
       0.524
yihI
Conserved protein of unknown function; A GTPase-activating protein (GAP) that modifies Der/EngA GTPase function. May play a role in ribosome biogenesis. Belongs to the YihI family.
  
     0.519
PSHAa1896
Homologs of previously reported genes of unknown function.
  
     0.481
PSHAa1818
Homologs of previously reported genes of unknown function; Belongs to the UPF0352 family.
  
     0.476
Your Current Organism:
Pseudoalteromonas haloplanktis
NCBI taxonomy Id: 326442
Other names: P. haloplanktis TAC125, Pseudoalteromonas haloplanktis TAC125, Pseudoalteromonas haloplanktis str. TAC125, Pseudoalteromonas haloplanktis strain TAC125
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.