Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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gene co-occurrence
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atoEPutative short-chain fatty acid transport protein (scFAT family); Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; transporter. (436 aa)    
Predicted Functional Partners:
rpsT
30S ribosomal subunit protein S20; Binds directly to 16S ribosomal RNA.
      
 0.647
PSHAa0137
Putative potassium channel; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; transporter.
       0.507
PSHAa0138
Putative orphan protein; No homology to any previously reported sequences.
       0.507
PSHAa2946
Putative permease; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; transporter.
 
   
 0.490
PSHAa1452
Isovaleryl-CoA dehydrogenase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
      
 0.451
betI
Putative transcriptional repressor for the cellular response to osmotic stress (TetR/AcrR family); Repressor involved in choline regulation of the bet genes.
      
 0.451
norR
Transcriptional regulator of anaerobic NO reduction and detoxification (EBP family); Function of homologous gene experimentally demonstrated in an other organism; regulator.
      
 0.450
Your Current Organism:
Pseudoalteromonas haloplanktis
NCBI taxonomy Id: 326442
Other names: P. haloplanktis TAC125, Pseudoalteromonas haloplanktis TAC125, Pseudoalteromonas haloplanktis str. TAC125, Pseudoalteromonas haloplanktis strain TAC125
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