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Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
PSHAa0137Putative potassium channel; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; transporter. (356 aa)    
Predicted Functional Partners:
PSHAa0138
Putative orphan protein; No homology to any previously reported sequences.
       0.848
PSHAa0042
Homologs of previously reported genes of unknown function.
 
     0.780
PSHAa0039
Conserved protein of unknown function, putative integral inner membrane protein; Homologs of previously reported genes of unknown function; membrane component.
  
     0.688
trkH
Potassium transport protein, requires TrkE (Trk family); Low-affinity potassium transport system. Interacts with Trk system potassium uptake protein TrkA; Belongs to the TrkH potassium transport family.
  
 
 0.643
speE-2
Putative spermine/spermidine synthase family protein; Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy-AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine.
 
     0.559
rsmB
16S rRNA m5C967 methyltransferase, S-adenosyl-L-methionine-dependent; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA.
  
    0.518
atoE
Putative short-chain fatty acid transport protein (scFAT family); Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; transporter.
       0.507
PSHAa2261
Conserved protein of unknown function with CYTH domain; Homologs of previously reported genes of unknown function.
 
     0.507
PSHAa2269
Putative orphan protein; No homology to any previously reported sequences.
  
     0.496
hemDX
uroporphyrinogen-III synthase HemD (N terminal)/Uroporphyrin-III C-methyltransferase (C terminal); Function of strongly homologous gene; enzyme.
  
    0.489
Your Current Organism:
Pseudoalteromonas haloplanktis
NCBI taxonomy Id: 326442
Other names: P. haloplanktis TAC125, Pseudoalteromonas haloplanktis TAC125, Pseudoalteromonas haloplanktis str. TAC125, Pseudoalteromonas haloplanktis strain TAC125
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