Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PSHAa0191Homologs of previously reported genes of unknown function. (80 aa)    
Predicted Functional Partners:
PSHAa0246
Homologs of previously reported genes of unknown function; carrier.
  
    0.670
PSHAa1892
Putative iron-sulfur cluster-binding protein FixG; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; carrier.
   
    0.626
PSHAa1864
Homologs of previously reported genes of unknown function.
  
     0.598
PSHAa1844
Putative Cbb3-type cytochrome oxidase, subunit 3; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy.
   
    0.541
ibpB
Small heat shock protein; Function of homologous gene experimentally demonstrated in an other organism; factor; Belongs to the small heat shock protein (HSP20) family.
  
    0.539
PSHAa2155
Putative protein W (OmpW) family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; membrane component.
   
    0.527
hemN
Coproporphyrinogen III oxidase, O2-independent, SAM and NAD(P)H dependent; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the anaerobic coproporphyrinogen-III oxidase family.
   
    0.526
ibpA
Small heat shock protein; Function of homologous gene experimentally demonstrated in an other organism; factor; Belongs to the small heat shock protein (HSP20) family.
  
    0.516
PSHAa1842
Cytochrome c oxidase, cbb3-type, subunit I; Function of homologous gene experimentally demonstrated in an other organism; carrier; Belongs to the heme-copper respiratory oxidase family.
   
    0.512
PSHAa0508
Homologs of previously reported genes of unknown function.
   
    0.510
Your Current Organism:
Pseudoalteromonas haloplanktis
NCBI taxonomy Id: 326442
Other names: P. haloplanktis TAC125, Pseudoalteromonas haloplanktis TAC125, Pseudoalteromonas haloplanktis str. TAC125, Pseudoalteromonas haloplanktis strain TAC125
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.