STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PSHAa0276Sodium-type polar flagellar protein motX; Function of homologous gene experimentally demonstrated in an other organism; transporter. (212 aa)    
Predicted Functional Partners:
PSHAa1833
Homologs of previously reported genes of unknown function.
  
     0.758
purA
Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family.
       0.739
PSHAa0506
Homologs of previously reported genes of unknown function.
  
     0.730
PSHAa0755
Homologs of previously reported genes of unknown function.
  
   
 0.719
PSHAa0762
Homologs of previously reported genes of unknown function.
  
   
 0.718
PSHAa0819
Homologs of previously reported genes of unknown function.
  
   
 0.712
PSHAa0613
Homologs of previously reported genes of unknown function.
  
   
 0.711
PSHAa0761
Homologs of previously reported genes of unknown function.
  
   
 0.709
ybeQ
Putative secreted protein with protein prenylyltransferase domain; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; enzyme.
  
     0.709
PSHAa0754
Homologs of previously reported genes of unknown function.
  
   
 0.697
Your Current Organism:
Pseudoalteromonas haloplanktis
NCBI taxonomy Id: 326442
Other names: P. haloplanktis TAC125, Pseudoalteromonas haloplanktis TAC125, Pseudoalteromonas haloplanktis str. TAC125, Pseudoalteromonas haloplanktis strain TAC125
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.