Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
PSHAa0276Sodium-type polar flagellar protein motX; Function of homologous gene experimentally demonstrated in an other organism; transporter. (212 aa)    
Predicted Functional Partners:
PSHAa0762
Homologs of previously reported genes of unknown function.
  
 
 
 0.904
PSHAa0761
Homologs of previously reported genes of unknown function.
  
 
 
 0.903
motY
Putative Component of sodium-driven polar flagellar motor; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; structural protein.
 
 
 0.854
fliF
Flagellar biosynthesis; The M ring may be actively involved in energy transduction. Belongs to the FliF family.
  
 
 
 0.817
PSHAa1833
Homologs of previously reported genes of unknown function.
  
     0.758
flgC
Flagellar biosynthesis; Function of strongly homologous gene; structural protein; Belongs to the flagella basal body rod proteins family.
   
 
 0.738
PSHAa0506
Homologs of previously reported genes of unknown function.
  
     0.730
PSHAa0755
Homologs of previously reported genes of unknown function.
  
     0.717
PSHAa0819
Homologs of previously reported genes of unknown function.
  
   
 0.716
PSHAa0613
Homologs of previously reported genes of unknown function.
  
     0.709
Your Current Organism:
Pseudoalteromonas haloplanktis
NCBI taxonomy Id: 326442
Other names: P. haloplanktis TAC125, Pseudoalteromonas haloplanktis TAC125, Pseudoalteromonas haloplanktis str. TAC125, Pseudoalteromonas haloplanktis strain TAC125
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