STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PSHAa0290Homologs of previously reported genes of unknown function. (279 aa)    
Predicted Functional Partners:
PSHAa0291
Putative glucose/ribitol dehydrogenase family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; enzyme.
 
  
 0.900
slyDB
Peptidyl-prolyl cis-trans isomerase, FkbP family; Function of strongly homologous gene; enzyme.
       0.852
PSHAa0287
Putative mandelate racemase/muconate lactonizing enzyme family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; enzyme.
 
   
 0.807
mltD
Putative membrane-bound lytic murein transglycosylase D [Precursor]; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; enzyme.
       0.786
PSHAa0294
Putative orphan protein; No homology to any previously reported sequences.
       0.744
nanA
N-acetylneuraminate lyase (aldolase); Function of strongly homologous gene; enzyme.
  
  
 0.684
PSHAa0288
Putative orphan protein; No homology to any previously reported sequences.
       0.665
PSHAa0295
Conserved protein of unknown function; Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division.
       0.648
PSHAa0289
Homologs of previously reported genes of unknown function.
       0.647
PSHAa0296
Putative orphan protein; No homology to any previously reported sequences.
       0.646
Your Current Organism:
Pseudoalteromonas haloplanktis
NCBI taxonomy Id: 326442
Other names: P. haloplanktis TAC125, Pseudoalteromonas haloplanktis TAC125, Pseudoalteromonas haloplanktis str. TAC125, Pseudoalteromonas haloplanktis strain TAC125
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.