Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
PSHAa0294Putative orphan protein; No homology to any previously reported sequences. (338 aa)    
Predicted Functional Partners:
mltD
Putative membrane-bound lytic murein transglycosylase D [Precursor]; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; enzyme.
       0.791
PSHAa0295
Conserved protein of unknown function; Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division.
  
    0.788
PSHAa0296
Putative orphan protein; No homology to any previously reported sequences.
       0.788
slyDB
Peptidyl-prolyl cis-trans isomerase, FkbP family; Function of strongly homologous gene; enzyme.
       0.703
PSHAa0290
Homologs of previously reported genes of unknown function.
       0.698
PSHAa0080
Putative secreted hydrolase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; enzyme.
  
     0.589
PSHAa0291
Putative glucose/ribitol dehydrogenase family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; enzyme.
   
   0.491
rlmJ
Conserved protein of unknown function; Specifically methylates the adenine in position 2030 of 23S rRNA.
       0.443
PSHAa0297
Putative orphan protein; No homology to any previously reported sequences.
       0.427
PSHAa0289
Homologs of previously reported genes of unknown function.
  
    0.423
Your Current Organism:
Pseudoalteromonas haloplanktis
NCBI taxonomy Id: 326442
Other names: P. haloplanktis TAC125, Pseudoalteromonas haloplanktis TAC125, Pseudoalteromonas haloplanktis str. TAC125, Pseudoalteromonas haloplanktis strain TAC125
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