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Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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Assay-based Predictions
experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ampHPutative beta-lactamase, penicillin-binding protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; enzyme. (513 aa)    
Predicted Functional Partners:
PSHAb0063
Putative peptidase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; enzyme.
 
     0.881
PSHAa0333
Putative transporter; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; transporter.
       0.791
PSHAa0331
Homologs of previously reported genes of unknown function.
       0.780
PSHAa0332
Putative orphan protein; No homology to any previously reported sequences.
       0.780
PSHAa0336
Putative histone deacetylase family protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy.
       0.748
PSHAa0334
Homologs of previously reported genes of unknown function.
       0.705
PSHAa0329
Putative 5-carboxymethyl-2-hydroxymuconate delta isomerase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; enzyme.
       0.684
PSHAa0330
Putative orphan protein; Doubtful CDS.
       0.498
nagZ
Beta-hexosaminidase A (N-acetyl-beta-glucosaminidase) (Beta-N-acetylhexosaminidase) (Chitobiase); Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the glycosyl hydrolase 3 family.
 
  
 0.454
PSHAa0614
Homologs of previously reported genes of unknown function; enzyme.
 
     0.424
Your Current Organism:
Pseudoalteromonas haloplanktis
NCBI taxonomy Id: 326442
Other names: P. haloplanktis TAC125, Pseudoalteromonas haloplanktis TAC125, Pseudoalteromonas haloplanktis str. TAC125, Pseudoalteromonas haloplanktis strain TAC125
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