Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PSHAa0336Putative histone deacetylase family protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy. (306 aa)    
Predicted Functional Partners:
PSHAa0332
Putative orphan protein; No homology to any previously reported sequences.
   
 0.834
PSHAa2902
Homologs of previously reported genes of unknown function; 11347268, 14672542.
    
 0.793
ampH
Putative beta-lactamase, penicillin-binding protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; enzyme.
       0.748
PSHAa1280
Homologs of previously reported genes of unknown function; membrane component.
   
 0.704
PSHAa0333
Putative transporter; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; transporter.
       0.697
glpF
Putative glycerol diffusion channel; Function of strongly homologous gene; transporter; Belongs to the MIP/aquaporin (TC 1.A.8) family.
    
   0.684
PSHAb0168
Putative sirtuin; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; enzyme.
    
 0.669
htpG
Chaperone protein htpG; Molecular chaperone. Has ATPase activity.
    
 0.628
yfiQ
Putative acyl-CoA synthetase, NAD(P)-binding, ATP-binding; Function of strongly homologous gene; enzyme.
 
     0.618
ndk
Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family.
    
   0.606
Your Current Organism:
Pseudoalteromonas haloplanktis
NCBI taxonomy Id: 326442
Other names: P. haloplanktis TAC125, Pseudoalteromonas haloplanktis TAC125, Pseudoalteromonas haloplanktis str. TAC125, Pseudoalteromonas haloplanktis strain TAC125
Server load: medium (44%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.