Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
cpxRTranscriptional regulatory protein CpxR; Function of homologous gene experimentally demonstrated in an other organism; regulator. (229 aa)    
Predicted Functional Partners:
PSHAa0374
Putative sensor histidine kinase protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; regulator.
 0.997
PSHAa0654
Homologs of previously reported genes of unknown function.
 
 
 0.926
PSHAb0289
Putative two-component hybrid sensor and regulator; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; regulator.
 
 
0.922
arcB
Aerobic respiration control sensor protein arcB; Function of strongly homologous gene; regulator.
 
 
 0.906
PSHAa0077
Putative sensor protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; receptor.
 
 
 0.905
PSHAa0373
Putative lysophospholipase L(2); Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; enzyme.
       0.868
PSHAa2621
Putative Sensory box sensor histidine kinase/response regulator; Function of strongly homologous gene; receptor.
 
 
 0.848
rstB
Sensory histidine kinase in two-component regulatory system with RstA; Function of homologous gene experimentally demonstrated in an other organism; regulator.
 
 
 0.846
PSHAa0860
Putative orphan protein; No homology to any previously reported sequences; regulator.
 
 
 0.846
phoR
Phosphate regulon sensor protein phoR; Function of homologous gene experimentally demonstrated in an other organism; regulator.
 
 0.844
Your Current Organism:
Pseudoalteromonas haloplanktis
NCBI taxonomy Id: 326442
Other names: P. haloplanktis TAC125, Pseudoalteromonas haloplanktis TAC125, Pseudoalteromonas haloplanktis str. TAC125, Pseudoalteromonas haloplanktis strain TAC125
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