Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
PSHAa0435Putative transcriptional regulator, AraC family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; regulator. (337 aa)    
Predicted Functional Partners:
PSHAa0436
Homologs of previously reported genes of unknown function.
 
     0.914
PSHAa0437
Putative tonB-dependent receptor; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; receptor.
 
     0.809
PSHAa0438
Putative phytase domain protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; enzyme.
 
     0.783
PSHAa0565
Putative transcriptional regulator; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy.
  
     0.746
PSHAa2329
Putative orphan protein; No homology to any previously reported sequences.
  
     0.521
PSHAa0847
Putative orphan protein; No homology to any previously reported sequences.
  
     0.477
PSHAa0851
Homologs of previously reported genes of unknown function.
  
     0.432
PSHAa1225
Homologs of previously reported genes of unknown function.
  
     0.402
Your Current Organism:
Pseudoalteromonas haloplanktis
NCBI taxonomy Id: 326442
Other names: P. haloplanktis TAC125, Pseudoalteromonas haloplanktis TAC125, Pseudoalteromonas haloplanktis str. TAC125, Pseudoalteromonas haloplanktis strain TAC125
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