Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| PSHAa1638 | fldB | PSHAa1638 | PSHAa0513 | Homologs of previously reported genes of unknown function. | Flavodoxin 2; Low-potential electron donor to a number of redox enzymes. Belongs to the flavodoxin family. | 0.453 |
| dsbC | fldB | PSHAa0515 | PSHAa0513 | Disulfide bond isomerase, periplasmic; Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process; Belongs to the thioredoxin family. DsbC subfamily. | Flavodoxin 2; Low-potential electron donor to a number of redox enzymes. Belongs to the flavodoxin family. | 0.737 |
| dsbC | recJ | PSHAa0515 | PSHAa0516 | Disulfide bond isomerase, periplasmic; Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process; Belongs to the thioredoxin family. DsbC subfamily. | Single-stranded-DNA-specific exonuclease, 5'--> 3'-specific; Function of homologous gene experimentally demonstrated in an other organism; enzyme. | 0.802 |
| dsbC | xerD | PSHAa0515 | PSHAa0514 | Disulfide bond isomerase, periplasmic; Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process; Belongs to the thioredoxin family. DsbC subfamily. | Site-specific tyrosine recombinase XerD; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids. | 0.824 |
| fldB | PSHAa1638 | PSHAa0513 | PSHAa1638 | Flavodoxin 2; Low-potential electron donor to a number of redox enzymes. Belongs to the flavodoxin family. | Homologs of previously reported genes of unknown function. | 0.453 |
| fldB | dsbC | PSHAa0513 | PSHAa0515 | Flavodoxin 2; Low-potential electron donor to a number of redox enzymes. Belongs to the flavodoxin family. | Disulfide bond isomerase, periplasmic; Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process; Belongs to the thioredoxin family. DsbC subfamily. | 0.737 |
| fldB | recJ | PSHAa0513 | PSHAa0516 | Flavodoxin 2; Low-potential electron donor to a number of redox enzymes. Belongs to the flavodoxin family. | Single-stranded-DNA-specific exonuclease, 5'--> 3'-specific; Function of homologous gene experimentally demonstrated in an other organism; enzyme. | 0.658 |
| fldB | xerD | PSHAa0513 | PSHAa0514 | Flavodoxin 2; Low-potential electron donor to a number of redox enzymes. Belongs to the flavodoxin family. | Site-specific tyrosine recombinase XerD; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids. | 0.801 |
| recJ | dsbC | PSHAa0516 | PSHAa0515 | Single-stranded-DNA-specific exonuclease, 5'--> 3'-specific; Function of homologous gene experimentally demonstrated in an other organism; enzyme. | Disulfide bond isomerase, periplasmic; Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process; Belongs to the thioredoxin family. DsbC subfamily. | 0.802 |
| recJ | fldB | PSHAa0516 | PSHAa0513 | Single-stranded-DNA-specific exonuclease, 5'--> 3'-specific; Function of homologous gene experimentally demonstrated in an other organism; enzyme. | Flavodoxin 2; Low-potential electron donor to a number of redox enzymes. Belongs to the flavodoxin family. | 0.658 |
| recJ | xerD | PSHAa0516 | PSHAa0514 | Single-stranded-DNA-specific exonuclease, 5'--> 3'-specific; Function of homologous gene experimentally demonstrated in an other organism; enzyme. | Site-specific tyrosine recombinase XerD; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids. | 0.751 |
| xerD | dsbC | PSHAa0514 | PSHAa0515 | Site-specific tyrosine recombinase XerD; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids. | Disulfide bond isomerase, periplasmic; Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process; Belongs to the thioredoxin family. DsbC subfamily. | 0.824 |
| xerD | fldB | PSHAa0514 | PSHAa0513 | Site-specific tyrosine recombinase XerD; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids. | Flavodoxin 2; Low-potential electron donor to a number of redox enzymes. Belongs to the flavodoxin family. | 0.801 |
| xerD | recJ | PSHAa0514 | PSHAa0516 | Site-specific tyrosine recombinase XerD; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids. | Single-stranded-DNA-specific exonuclease, 5'--> 3'-specific; Function of homologous gene experimentally demonstrated in an other organism; enzyme. | 0.751 |