Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PSHAa0565Putative transcriptional regulator; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy. (336 aa)    
Predicted Functional Partners:
PSHAa0435
Putative transcriptional regulator, AraC family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; regulator.
  
     0.746
PSHAa0567
Homologs of previously reported genes of unknown function.
 
     0.740
PSHAa0566
Putative orphan protein; No homology to any previously reported sequences.
       0.575
PSHAa0877
Putative steroid degradation protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; enzyme.
  
     0.460
PSHAa1269
Putative fatty acid desaturase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
  
   
 0.409
PSHAa2449
Homologs of previously reported genes of unknown function; enzyme.
 
    0.409
rpoB
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
  
 
   0.407
PSHAb0355
Putative acyl-CoA thioesterase, TesB family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; enzyme.
  
     0.403
Your Current Organism:
Pseudoalteromonas haloplanktis
NCBI taxonomy Id: 326442
Other names: P. haloplanktis TAC125, Pseudoalteromonas haloplanktis TAC125, Pseudoalteromonas haloplanktis str. TAC125, Pseudoalteromonas haloplanktis strain TAC125
Server load: medium (46%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.