Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PSHAa0576Homologs of previously reported genes of unknown function. (106 aa)    
Predicted Functional Partners:
PSHAa0575
Putative Zn(II)-responsive transcriptional regulator, regulates Zn export (MerR family); Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; factor.
       0.546
PSHAa0577
Putative metal ion efflux outer membrane factor protein family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy.
       0.463
czcB
Putative Cobalt-zinc-cadmium resistance protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; transporter.
       0.453
czcA
Cobalt-zinc-cadmium resistance protein czcA (Cation efflux system protein czcA); Function of strongly homologous gene; transporter; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
       0.450
Your Current Organism:
Pseudoalteromonas haloplanktis
NCBI taxonomy Id: 326442
Other names: P. haloplanktis TAC125, Pseudoalteromonas haloplanktis TAC125, Pseudoalteromonas haloplanktis str. TAC125, Pseudoalteromonas haloplanktis strain TAC125
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